Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm11500-201ENSMUST00000118237 601 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm11331-201ENSMUST00000119764 288 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm3150-201ENSMUST00000166418 204 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx1Q8C8B0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Mir3102-201ENSMUST00000175555 104 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Mir7686-201ENSMUST00000200604 57 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.79□□□□□ -0.2
Alx1Q8C8B0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms