Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim9Q8C7M3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm38117-201ENSMUST00000194653 939 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm18038-201ENSMUST00000197900 485 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm6450-201ENSMUST00000200896 574 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim9Q8C7M3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm28937-201ENSMUST00000185413 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm29400-201ENSMUST00000187208 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm28662-201ENSMUST00000188446 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm28251-201ENSMUST00000188835 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm37318-201ENSMUST00000194325 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm38017-201ENSMUST00000194768 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm37287-201ENSMUST00000195449 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm37793-201ENSMUST00000195548 695 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Gm26448-201ENSMUST00000082446 203 ntBASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim9Q8C7M3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms