Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cfap54Q8C6S9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm13094-201ENSMUST00000117930 409 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm11475-201ENSMUST00000118482 476 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm13827-201ENSMUST00000148801 372 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm25394-201ENSMUST00000157338 133 ntBASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cfap54Q8C6S9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm14113-201ENSMUST00000121399 976 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm15982-201ENSMUST00000121681 554 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm10580-201ENSMUST00000097985 396 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm10582-201ENSMUST00000097987 396 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm10583-201ENSMUST00000097988 396 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm23745-201ENSMUST00000104230 125 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm23595-201ENSMUST00000104306 130 ntBASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cfap54Q8C6S9 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms