Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Usp44Q8C2S0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp44Q8C2S0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm4909-201ENSMUST00000118749 794 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm11450-201ENSMUST00000121144 333 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm8199-201ENSMUST00000121323 823 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm18734-201ENSMUST00000172937 808 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm5369-201ENSMUST00000217499 588 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp44Q8C2S0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gm7848-201ENSMUST00000210739 718 ntBASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp44Q8C2S0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp44Q8C2S0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.83□□□□□ -0.2
Usp44Q8C2S0 Gm7851-201ENSMUST00000117574 323 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms