Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm45186-201ENSMUST00000206874 478 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sfr1Q8BP27 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm5616-201ENSMUST00000165252 384 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm8741-201ENSMUST00000174736 384 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm5706-201ENSMUST00000181525 993 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm29199-201ENSMUST00000187766 775 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gm8385-201ENSMUST00000058999 643 ntBASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sfr1Q8BP27 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Sfr1Q8BP27 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sfr1Q8BP27 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sfr1Q8BP27 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Sfr1Q8BP27 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms