Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Gm18367-201ENSMUST00000176139 600 ntBASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Gm44329-201ENSMUST00000197469 112 ntBASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcal1Q8BJL0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm25076-201ENSMUST00000104098 132 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Mir1956-201ENSMUST00000157748 65 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm10731-201ENSMUST00000181171 448 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm45113-201ENSMUST00000207518 165 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcal1Q8BJL0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smarcal1Q8BJL0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smarcal1Q8BJL0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms