Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm7399-201ENSMUST00000032395 858 ntBASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc40Q8BI79 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Gm35960-201ENSMUST00000202712 767 ntBASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc40Q8BI79 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm30285-201ENSMUST00000214614 422 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm9368-201ENSMUST00000219348 831 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc40Q8BI79 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms