Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm25214-201ENSMUST00000104573 129 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm11531-201ENSMUST00000117614 555 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm7722-201ENSMUST00000120646 741 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf38Q8BI21 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm10434-201ENSMUST00000101158 471 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm14441-201ENSMUST00000121960 540 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Mospd4-201ENSMUST00000180618 576 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm9899-201ENSMUST00000065519 555 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf38Q8BI21 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms