Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm37444-201ENSMUST00000193605 439 ntBASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm42937-201ENSMUST00000197360 752 ntBASIC13.92□□□□□ -0.18
Samm50Q8BGH2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm44958-201ENSMUST00000203734 736 ntBASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gzmn-202ENSMUST00000225535 989 ntBASIC13.92□□□□□ -0.18
Samm50Q8BGH2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Samm50Q8BGH2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm13665-201ENSMUST00000120830 528 ntBASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm8885-201ENSMUST00000189382 598 ntBASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Samm50Q8BGH2 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm15236-201ENSMUST00000117309 379 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm5070-201ENSMUST00000177599 862 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm2383-201ENSMUST00000181461 807 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Samm50Q8BGH2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms