Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm15207-201ENSMUST00000119259 442 ntBASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm28686-201ENSMUST00000187404 609 ntBASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Gm18730-201ENSMUST00000218038 343 ntBASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpp38Q80UU2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rpp38Q80UU2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rpp38Q80UU2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm11663-201ENSMUST00000117888 290 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm12196-201ENSMUST00000120954 262 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm2260-201ENSMUST00000184965 657 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm43002-201ENSMUST00000200310 155 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Rps4l-202ENSMUST00000204242 789 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm18065-201ENSMUST00000221395 526 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms