Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm8894-201ENSMUST00000074642 666 ntBASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf38bQ80SY5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm7541-201ENSMUST00000118361 535 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm23085-201ENSMUST00000157849 293 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm4862-201ENSMUST00000170405 438 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Snora73b-201ENSMUST00000083419 205 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Prpf38bQ80SY5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf38bQ80SY5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm9230-201ENSMUST00000188228 532 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm10774-201ENSMUST00000188689 204 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Mir7686-201ENSMUST00000200604 57 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf38bQ80SY5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms