Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Gm44329-201ENSMUST00000197469 112 ntBASIC20.86■□□□□ 0.93
Rtl1Q7M732 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl1Q7M732 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Gm23694-201ENSMUST00000179335 110 ntBASIC20.85■□□□□ 0.93
Rtl1Q7M732 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Lgi3-203ENSMUST00000226548 1001 ntBASIC20.85■□□□□ 0.93
Rtl1Q7M732 AC159002.1-201ENSMUST00000226714 924 ntBASIC20.85■□□□□ 0.93
Rtl1Q7M732 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl1Q7M732 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gm29164-201ENSMUST00000185454 1024 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 AC154257.1-202ENSMUST00000224729 843 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 AC154589.2-201ENSMUST00000228847 251 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gm14665-201ENSMUST00000122294 557 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC20.84■□□□□ 0.93
Rtl1Q7M732 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl1Q7M732 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms