Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm43912-201ENSMUST00000204352 538 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm7082-201ENSMUST00000209880 969 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.47□□□□□ -0.25
Ddx55Q6ZPL9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm12218-201ENSMUST00000117666 399 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm12036-201ENSMUST00000120008 530 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm8197-202ENSMUST00000193422 934 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ddx55Q6ZPL9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx55Q6ZPL9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx55Q6ZPL9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ddx55Q6ZPL9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Ddx55Q6ZPL9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Gm18776-201ENSMUST00000188833 654 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ddx55Q6ZPL9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms