Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm7765-201ENSMUST00000182585 974 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm2594-201ENSMUST00000214774 742 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm16209-201ENSMUST00000118457 627 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm10171-201ENSMUST00000126220 628 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 AC164978.2-201ENSMUST00000226645 857 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm10233-201ENSMUST00000089275 628 ntBASIC10.05□□□□□ -0.8
Rif1Q6PR54 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rif1Q6PR54 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Paupar-201ENSMUST00000194826 3482 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm11736-201ENSMUST00000121468 505 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm22344-201ENSMUST00000122642 278 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms