Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm9369-201ENSMUST00000196009 733 ntBASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 AC168279.1-201ENSMUST00000214611 382 ntBASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Gm5434-202ENSMUST00000222384 1451 ntBASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Gm5434-201ENSMUST00000071825 1451 ntBASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd4Q6PDQ2 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Gm15329-201ENSMUST00000121408 155 ntBASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Gm5822-201ENSMUST00000161562 1378 ntBASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Gm4862-201ENSMUST00000170405 438 ntBASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Gm7525-201ENSMUST00000219425 454 ntBASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chd4Q6PDQ2 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm44056-201ENSMUST00000204623 1427 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm12663-201ENSMUST00000118481 958 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm5621-201ENSMUST00000187303 640 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm29067-201ENSMUST00000190821 470 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 CT573086.4-201ENSMUST00000226729 342 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 AC130477.1-201ENSMUST00000226982 420 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm9244-201ENSMUST00000056767 2129 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm13549-201ENSMUST00000118339 796 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm16219-201ENSMUST00000120096 274 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Gm44647-201ENSMUST00000207402 428 ntBASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd4Q6PDQ2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gm9915-201ENSMUST00000066196 1383 ntBASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gm43163-201ENSMUST00000196571 442 ntBASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gm9353-201ENSMUST00000200472 604 ntBASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gm18035-201ENSMUST00000211962 589 ntBASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd4Q6PDQ2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms