Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd3Q6P9Z1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm15610-201ENSMUST00000120584 195 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.87□□□□□ -0.67
Smarcd3Q6P9Z1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Gm22018-201ENSMUST00000104357 131 ntBASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Gm14832-201ENSMUST00000121289 322 ntBASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.86□□□□□ -0.67
Smarcd3Q6P9Z1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms