Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gm2260-201ENSMUST00000184965 657 ntBASIC12.04□□□□□ -0.48
Casc4Q6P2L7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Casc4Q6P2L7 AY036118-201ENSMUST00000200021 923 ntBASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gm5455-201ENSMUST00000058710 715 ntBASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Casc4Q6P2L7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm22133-201ENSMUST00000102082 109 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm4607-201ENSMUST00000206649 577 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm17931-201ENSMUST00000208132 634 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Casc4Q6P2L7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Casc4Q6P2L7 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm5419-201ENSMUST00000119301 527 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm15610-201ENSMUST00000120584 195 ntBASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.02□□□□□ -0.49
Casc4Q6P2L7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms