Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm14381-201ENSMUST00000122105 414 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm25700-201ENSMUST00000177693 110 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm44364-201ENSMUST00000198368 141 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm43179-201ENSMUST00000198797 275 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm43962-201ENSMUST00000203898 190 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sp140Q6NSQ5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sp140Q6NSQ5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Gm38317-201ENSMUST00000195564 343 ntBASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Gm44651-201ENSMUST00000207343 372 ntBASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Gm45331-201ENSMUST00000209868 554 ntBASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sp140Q6NSQ5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Gm15004-201ENSMUST00000119192 630 ntBASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.01□□□□□ -0.49
Sp140Q6NSQ5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms