Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm38266-201ENSMUST00000194931 421 ntBASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Gm9368-201ENSMUST00000219348 831 ntBASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Olfr582-201ENSMUST00000098212 960 ntBASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt39Q6IFX4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm7046-201ENSMUST00000221351 977 ntBASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm8420-201ENSMUST00000097103 598 ntBASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt39Q6IFX4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Krt39Q6IFX4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.08□□□□□ -0.31
Krt39Q6IFX4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.08□□□□□ -0.31
Krt39Q6IFX4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Krt39Q6IFX4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.08□□□□□ -0.31
Krt39Q6IFX4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Gm13297-201ENSMUST00000120205 934 ntBASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Gm38241-201ENSMUST00000192641 898 ntBASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Gm43179-201ENSMUST00000198797 275 ntBASIC13.08□□□□□ -0.32
Krt39Q6IFX4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Krt39Q6IFX4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.07□□□□□ -0.32
Krt39Q6IFX4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms