Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gm14165-201ENSMUST00000121456 952 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.91□□□□□ -0.66
AtmQ62388 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.91□□□□□ -0.66
AtmQ62388 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.91□□□□□ -0.66
AtmQ62388 AC124613.1-201ENSMUST00000198711 88 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.91□□□□□ -0.66
AtmQ62388 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gm8111-201ENSMUST00000117659 987 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Gm14441-201ENSMUST00000121960 540 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.91□□□□□ -0.66
AtmQ62388 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
AtmQ62388 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
AtmQ62388 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
AtmQ62388 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.9□□□□□ -0.66
AtmQ62388 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
AtmQ62388 Gm8226-201ENSMUST00000190511 798 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Gm37365-201ENSMUST00000193109 409 ntBASIC10.9□□□□□ -0.66
AtmQ62388 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.9□□□□□ -0.66
AtmQ62388 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.9□□□□□ -0.66
AtmQ62388 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
AtmQ62388 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
AtmQ62388 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.9□□□□□ -0.66
AtmQ62388 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
AtmQ62388 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Gm24933-201ENSMUST00000103762 110 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Gm23252-201ENSMUST00000103776 110 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.9□□□□□ -0.66
AtmQ62388 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Gm15617-201ENSMUST00000118973 771 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Gm26443-201ENSMUST00000179610 110 ntBASIC10.9□□□□□ -0.66
AtmQ62388 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
AtmQ62388 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.9□□□□□ -0.66
AtmQ62388 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms