Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
VcanQ62059 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.8□□□□□ -0.68
VcanQ62059 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.8□□□□□ -0.68
VcanQ62059 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
VcanQ62059 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VcanQ62059 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.8□□□□□ -0.68
VcanQ62059 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC10.8□□□□□ -0.68
VcanQ62059 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.8□□□□□ -0.68
VcanQ62059 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.8□□□□□ -0.68
VcanQ62059 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.8□□□□□ -0.68
VcanQ62059 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VcanQ62059 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
VcanQ62059 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gm14639-201ENSMUST00000120850 866 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gm42751-201ENSMUST00000198065 559 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
VcanQ62059 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VcanQ62059 Gm15549-201ENSMUST00000121595 622 ntBASIC10.79□□□□□ -0.68
VcanQ62059 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.79□□□□□ -0.68
VcanQ62059 Gm29689-201ENSMUST00000221076 589 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VcanQ62059 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.79□□□□□ -0.68
VcanQ62059 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
VcanQ62059 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm17221-201ENSMUST00000163909 481 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm17073-201ENSMUST00000168069 556 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm20781-201ENSMUST00000193154 693 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm21736-201ENSMUST00000195399 693 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Gm4903-201ENSMUST00000210462 405 ntBASIC10.79□□□□□ -0.68
VcanQ62059 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.79□□□□□ -0.68
VcanQ62059 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VcanQ62059 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VcanQ62059 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
VcanQ62059 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.78□□□□□ -0.68
VcanQ62059 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
VcanQ62059 Gm14176-201ENSMUST00000121302 477 ntBASIC10.78□□□□□ -0.68
VcanQ62059 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.78□□□□□ -0.68
VcanQ62059 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
VcanQ62059 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VcanQ62059 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms