Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.02□□□□□ -0.16
Ctr9Q62018 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctr9Q62018 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.02□□□□□ -0.17
Ctr9Q62018 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.02□□□□□ -0.17
Ctr9Q62018 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Gm45575-201ENSMUST00000210283 548 ntBASIC14.02□□□□□ -0.17
Ctr9Q62018 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctr9Q62018 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.02□□□□□ -0.17
Ctr9Q62018 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctr9Q62018 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Gm43947-201ENSMUST00000203019 959 ntBASIC14.01□□□□□ -0.17
Ctr9Q62018 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.01□□□□□ -0.17
Ctr9Q62018 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Ntng1-201ENSMUST00000051253 327 ntBASIC14.01□□□□□ -0.17
Ctr9Q62018 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.01□□□□□ -0.17
Ctr9Q62018 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ctr9Q62018 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ctr9Q62018 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctr9Q62018 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14□□□□□ -0.17
Ctr9Q62018 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Gm6397-201ENSMUST00000161973 1069 ntBASIC14□□□□□ -0.17
Ctr9Q62018 Gm9192-201ENSMUST00000183221 985 ntBASIC14□□□□□ -0.17
Ctr9Q62018 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14□□□□□ -0.17
Ctr9Q62018 Gm7551-201ENSMUST00000089593 1074 ntBASIC14□□□□□ -0.17
Ctr9Q62018 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ctr9Q62018 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctr9Q62018 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ctr9Q62018 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ctr9Q62018 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14□□□□□ -0.17
Ctr9Q62018 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ctr9Q62018 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm13809-201ENSMUST00000117921 597 ntBASIC13.99□□□□□ -0.17
Ctr9Q62018 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ctr9Q62018 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.99□□□□□ -0.17
Ctr9Q62018 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms