Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm11783-201ENSMUST00000119549 885 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm15566-201ENSMUST00000121130 590 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm26047-201ENSMUST00000157308 113 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm37835-201ENSMUST00000193305 361 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm26047-202ENSMUST00000198840 115 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm42997-202ENSMUST00000200321 985 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm45113-201ENSMUST00000207518 165 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.34□□□□□ -0.43
Smarcd1Q61466 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd1Q61466 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.43
Smarcd1Q61466 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcd1Q61466 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Smarcd1Q61466 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Smarcd1Q61466 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm35960-201ENSMUST00000202712 767 ntBASIC12.33□□□□□ -0.44
Smarcd1Q61466 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Gm8959-201ENSMUST00000213150 571 ntBASIC12.33□□□□□ -0.44
Smarcd1Q61466 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.33□□□□□ -0.44
Smarcd1Q61466 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd1Q61466 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.33□□□□□ -0.44
Smarcd1Q61466 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd1Q61466 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms