Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.36□□□□□ -0.59
Xrcc1Q60596 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xrcc1Q60596 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm15515-201ENSMUST00000117827 822 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Mir7070-201ENSMUST00000183657 86 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm9136-201ENSMUST00000193368 454 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.35□□□□□ -0.59
Xrcc1Q60596 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xrcc1Q60596 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm12196-201ENSMUST00000120954 262 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Mir5120-201ENSMUST00000175020 78 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm27530-201ENSMUST00000184096 98 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms