Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Gm12029-201ENSMUST00000120073 832 ntBASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.63□□□□□ -0.39
Shroom1Q5SX79 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm14460-201ENSMUST00000121511 639 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm8815-201ENSMUST00000173809 620 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm27438-201ENSMUST00000183480 110 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm17831-201ENSMUST00000205579 900 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Shroom1Q5SX79 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms