Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gm7940-201ENSMUST00000218195 769 ntBASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Nsd1-205ENSMUST00000224693 852 ntBASIC14.21□□□□□ -0.13
Vps54Q5SPW0 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps54Q5SPW0 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.21□□□□□ -0.13
Vps54Q5SPW0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps54Q5SPW0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Paupar-201ENSMUST00000194826 3482 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm13263-201ENSMUST00000121271 838 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm10051-201ENSMUST00000145209 414 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm37835-201ENSMUST00000193305 361 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm43378-201ENSMUST00000199336 582 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps54Q5SPW0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Pck2-205ENSMUST00000226352 2784 ntBASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Gm11960-201ENSMUST00000122068 925 ntBASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.19□□□□□ -0.14
Vps54Q5SPW0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps54Q5SPW0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms