Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc88aQ5SNZ0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm14807-201ENSMUST00000116640 983 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm43912-201ENSMUST00000204352 538 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm14005-208ENSMUST00000223654 681 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm12990-201ENSMUST00000120372 468 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm4978-201ENSMUST00000071565 801 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm20495-201ENSMUST00000173902 235 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm9507-202ENSMUST00000180157 654 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc88aQ5SNZ0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc88aQ5SNZ0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm5257-201ENSMUST00000121823 790 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms