Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm24255-201ENSMUST00000104481 128 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14723-201ENSMUST00000118686 215 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14381-201ENSMUST00000122105 414 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm3961-201ENSMUST00000204425 994 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav5d-4Q5R1F6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm15198-201ENSMUST00000117283 177 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm38241-201ENSMUST00000192641 898 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Rprl1-202ENSMUST00000198476 238 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm43179-201ENSMUST00000198797 275 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms