Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fam196aQ3USH1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm9166-201ENSMUST00000120293 561 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm37782-201ENSMUST00000194879 678 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Gm35960-201ENSMUST00000202712 767 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fam196aQ3USH1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fam196aQ3USH1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm9673-201ENSMUST00000119287 781 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm25830-201ENSMUST00000158923 132 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm7904-201ENSMUST00000217049 465 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms