Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3bQ3ULL6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm11439-201ENSMUST00000118598 409 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm12997-201ENSMUST00000120207 640 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm24990-201ENSMUST00000157406 323 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3bQ3ULL6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gm11509-201ENSMUST00000117358 325 ntBASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gm2553-201ENSMUST00000215986 605 ntBASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3bQ3ULL6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.68□□□□□ -0.38
Upf3bQ3ULL6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3bQ3ULL6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3bQ3ULL6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3bQ3ULL6 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.68□□□□□ -0.38
Upf3bQ3ULL6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms