Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm23432-201ENSMUST00000157181 131 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm7741-201ENSMUST00000181445 989 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm18124-201ENSMUST00000210695 706 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm14227-201ENSMUST00000119431 629 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm23647-201ENSMUST00000175042 109 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Rn5s-201ENSMUST00000177555 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm22109-201ENSMUST00000177995 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm22291-201ENSMUST00000178027 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm23284-201ENSMUST00000178069 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm25018-201ENSMUST00000179081 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm25212-201ENSMUST00000179432 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gm26391-201ENSMUST00000179843 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms