Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limch1Q3UH68 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Mir1943-201ENSMUST00000158276 73 ntBASIC13.97□□□□□ -0.17
Limch1Q3UH68 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 AU022133-201ENSMUST00000200601 873 ntBASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.97□□□□□ -0.17
Limch1Q3UH68 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Limch1Q3UH68 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm11989-201ENSMUST00000117240 672 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12616-201ENSMUST00000118594 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm11362-201ENSMUST00000118838 850 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12624-201ENSMUST00000177615 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12621-201ENSMUST00000177760 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12615-201ENSMUST00000177970 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12622-201ENSMUST00000177975 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12627-201ENSMUST00000178412 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12625-201ENSMUST00000179122 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12614-201ENSMUST00000179586 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm12613-201ENSMUST00000180323 382 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm18893-201ENSMUST00000198416 943 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Gm7848-201ENSMUST00000210739 718 ntBASIC13.96□□□□□ -0.17
Limch1Q3UH68 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Limch1Q3UH68 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.96□□□□□ -0.18
Limch1Q3UH68 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms