Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.65□□□□□ -0.55
Q3KNL4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Q3KNL4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Q3KNL4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Q3KNL4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Q3KNL4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Q3KNL4 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.64□□□□□ -0.55
Q3KNL4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Gm23931-201ENSMUST00000103842 109 ntBASIC11.64□□□□□ -0.55
Q3KNL4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Q3KNL4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Q3KNL4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.64□□□□□ -0.55
Q3KNL4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.64□□□□□ -0.55
Q3KNL4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Q3KNL4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.64□□□□□ -0.55
Q3KNL4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Q3KNL4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.64□□□□□ -0.55
Q3KNL4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 Gm11793-201ENSMUST00000120433 981 ntBASIC11.63□□□□□ -0.55
Q3KNL4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.63□□□□□ -0.55
Q3KNL4 Gm27572-201ENSMUST00000183702 255 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Gm7046-201ENSMUST00000221351 977 ntBASIC11.63□□□□□ -0.55
Q3KNL4 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.63□□□□□ -0.55
Q3KNL4 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.63□□□□□ -0.55
Q3KNL4 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.63□□□□□ -0.55
Q3KNL4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Q3KNL4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.63□□□□□ -0.55
Q3KNL4 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.63□□□□□ -0.55
Q3KNL4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.63□□□□□ -0.55
Q3KNL4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Q3KNL4 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Q3KNL4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Q3KNL4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Q3KNL4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Q3KNL4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Q3KNL4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms