Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chrna5Q2MKA5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gm25492-201ENSMUST00000157383 129 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Mir8093-201ENSMUST00000185043 137 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gm5996-201ENSMUST00000211110 718 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chrna5Q2MKA5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chrna5Q2MKA5 Cog3-203ENSMUST00000227473 4197 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm15549-201ENSMUST00000121595 622 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm14441-201ENSMUST00000121960 540 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Chrna5Q2MKA5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chrna5Q2MKA5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms