Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm29199-201ENSMUST00000187766 775 ntBASIC10.96□□□□□ -0.65
Col10a1Q05306 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col10a1Q05306 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col10a1Q05306 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Col10a1Q05306 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col10a1Q05306 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.96□□□□□ -0.66
Col10a1Q05306 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col10a1Q05306 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm11439-201ENSMUST00000118598 409 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm24990-201ENSMUST00000157406 323 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm27341-201ENSMUST00000183570 106 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm4157-201ENSMUST00000211647 679 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.95□□□□□ -0.66
Col10a1Q05306 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.95□□□□□ -0.66
Col10a1Q05306 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col10a1Q05306 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col10a1Q05306 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.94□□□□□ -0.66
Col10a1Q05306 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col10a1Q05306 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.94□□□□□ -0.66
Col10a1Q05306 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.94□□□□□ -0.66
Col10a1Q05306 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col10a1Q05306 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms