Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13□□□□□ -0.33
Tff2Q03404 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tff2Q03404 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13□□□□□ -0.33
Tff2Q03404 Gm14892-201ENSMUST00000117636 267 ntBASIC13□□□□□ -0.33
Tff2Q03404 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Tff2Q03404 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13□□□□□ -0.33
Tff2Q03404 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tff2Q03404 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Gm10807-201ENSMUST00000177134 795 ntBASIC13□□□□□ -0.33
Tff2Q03404 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13□□□□□ -0.33
Tff2Q03404 Gm43778-201ENSMUST00000199438 199 ntBASIC13□□□□□ -0.33
Tff2Q03404 Gm18460-201ENSMUST00000208088 464 ntBASIC13□□□□□ -0.33
Tff2Q03404 Gm45592-201ENSMUST00000209605 1043 ntBASIC13□□□□□ -0.33
Tff2Q03404 Gm4811-201ENSMUST00000220879 1220 ntBASIC13□□□□□ -0.33
Tff2Q03404 AC126799.1-201ENSMUST00000221976 246 ntBASIC13□□□□□ -0.33
Tff2Q03404 AC122346.3-201ENSMUST00000223983 306 ntBASIC13□□□□□ -0.33
Tff2Q03404 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Tff2Q03404 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tff2Q03404 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13□□□□□ -0.33
Tff2Q03404 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13□□□□□ -0.33
Tff2Q03404 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff2Q03404 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Tff2Q03404 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Gm14807-201ENSMUST00000116640 983 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 Gm25545-201ENSMUST00000122673 323 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.99□□□□□ -0.33
Tff2Q03404 Gm4862-201ENSMUST00000170405 438 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 Gm42816-201ENSMUST00000198433 325 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.99□□□□□ -0.33
Tff2Q03404 Gm17825-201ENSMUST00000206836 794 ntBASIC12.99□□□□□ -0.33
Tff2Q03404 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.99□□□□□ -0.33
Tff2Q03404 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tff2Q03404 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tff2Q03404 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tff2Q03404 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.98□□□□□ -0.33
Tff2Q03404 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tff2Q03404 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.98□□□□□ -0.33
Tff2Q03404 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm5257-201ENSMUST00000121823 790 ntBASIC12.98□□□□□ -0.33
Tff2Q03404 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.98□□□□□ -0.33
Tff2Q03404 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.98□□□□□ -0.33
Tff2Q03404 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tff2Q03404 Gm18204-201ENSMUST00000209835 793 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms