Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm18204-201ENSMUST00000209835 793 ntBASIC14.84□□□□□ -0.03
Smarcc1P97496 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.84□□□□□ -0.03
Smarcc1P97496 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcc1P97496 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcc1P97496 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smarcc1P97496 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm13351-201ENSMUST00000118087 414 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm14270-201ENSMUST00000118388 846 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.83□□□□□ -0.04
Smarcc1P97496 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm26989-201ENSMUST00000182608 749 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc1P97496 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc1P97496 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.83□□□□□ -0.04
Smarcc1P97496 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm24791-201ENSMUST00000104284 131 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm15036-201ENSMUST00000118880 400 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm26047-201ENSMUST00000157308 113 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm22146-201ENSMUST00000157397 288 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm26047-202ENSMUST00000198840 115 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm45500-201ENSMUST00000211676 803 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.82□□□□□ -0.04
Smarcc1P97496 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcc1P97496 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc1P97496 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms