Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim43cP86449 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43cP86449 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43cP86449 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim43cP86449 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43cP86449 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm27552-201ENSMUST00000183351 62 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Gm27844-201ENSMUST00000183613 62 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Gm38117-201ENSMUST00000194653 939 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Gm6867-201ENSMUST00000219165 425 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim43cP86449 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm26448-201ENSMUST00000082446 203 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.88□□□□□ -0.35
Trim43cP86449 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43cP86449 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim43cP86449 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim43cP86449 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim43cP86449 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Gm12857-201ENSMUST00000117678 592 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Gm2260-201ENSMUST00000184965 657 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim43cP86449 Gm28071-201ENSMUST00000190355 478 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Gm5982-201ENSMUST00000196234 512 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.87□□□□□ -0.35
Trim43cP86449 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43cP86449 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43cP86449 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms