Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Shox2P70390 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shox2P70390 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Gm12203-201ENSMUST00000118235 598 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.68□□□□□ -0.54
Shox2P70390 Gm12209-201ENSMUST00000120089 596 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Gm9192-201ENSMUST00000183221 985 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.68□□□□□ -0.54
Shox2P70390 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Gm38671-201ENSMUST00000200573 130 ntBASIC11.68□□□□□ -0.54
Shox2P70390 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shox2P70390 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shox2P70390 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shox2P70390 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Shox2P70390 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Shox2P70390 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Shox2P70390 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Gm44405-201ENSMUST00000198952 126 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm45925-201ENSMUST00000218882 744 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Gm22058-201ENSMUST00000083393 310 ntBASIC11.67□□□□□ -0.54
Shox2P70390 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms