Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.18□□□□□ -0.46
Msx3P70354 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Gm11960-201ENSMUST00000122068 925 ntBASIC12.18□□□□□ -0.46
Msx3P70354 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx3P70354 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Msx3P70354 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Gm38317-201ENSMUST00000195564 343 ntBASIC12.18□□□□□ -0.46
Msx3P70354 Gm43758-201ENSMUST00000199500 367 ntBASIC12.18□□□□□ -0.46
Msx3P70354 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Gm2553-201ENSMUST00000215986 605 ntBASIC12.18□□□□□ -0.46
Msx3P70354 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Gm5705-201ENSMUST00000066241 711 ntBASIC12.18□□□□□ -0.46
Msx3P70354 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Msx3P70354 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Msx3P70354 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msx3P70354 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.18□□□□□ -0.46
Msx3P70354 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.17□□□□□ -0.46
Msx3P70354 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Gm22133-201ENSMUST00000102082 109 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Gm43822-201ENSMUST00000200285 476 ntBASIC12.17□□□□□ -0.46
Msx3P70354 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Msx3P70354 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Msx3P70354 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.17□□□□□ -0.46
Msx3P70354 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.17□□□□□ -0.46
Msx3P70354 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msx3P70354 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.16□□□□□ -0.46
Msx3P70354 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msx3P70354 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Msx3P70354 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Msx3P70354 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Msx3P70354 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Msx3P70354 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.16□□□□□ -0.46
Msx3P70354 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.16□□□□□ -0.46
Msx3P70354 Gm43002-201ENSMUST00000200310 155 ntBASIC12.16□□□□□ -0.46
Msx3P70354 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.16□□□□□ -0.46
Msx3P70354 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Gm8420-201ENSMUST00000097103 598 ntBASIC12.16□□□□□ -0.46
Msx3P70354 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Msx3P70354 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Msx3P70354 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msx3P70354 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Msx3P70354 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms