Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cux2P70298 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cux2P70298 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cux2P70298 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC19.07■□□□□ 0.64
Cux2P70298 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC19.07■□□□□ 0.64
Cux2P70298 Gm26174-201ENSMUST00000158415 219 ntBASIC19.07■□□□□ 0.64
Cux2P70298 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cux2P70298 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC19.07■□□□□ 0.64
Cux2P70298 Gm17944-201ENSMUST00000186351 643 ntBASIC19.07■□□□□ 0.64
Cux2P70298 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cux2P70298 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cux2P70298 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cux2P70298 Gm38192-201ENSMUST00000194364 1847 ntBASIC19.07■□□□□ 0.64
Cux2P70298 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC19.06■□□□□ 0.64
Cux2P70298 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC19.06■□□□□ 0.64
Cux2P70298 Gm8226-201ENSMUST00000190511 798 ntBASIC19.06■□□□□ 0.64
Cux2P70298 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Gm43966-201ENSMUST00000203301 612 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Gm8768-201ENSMUST00000220020 826 ntBASIC19.06■□□□□ 0.64
Cux2P70298 AC154477.1-201ENSMUST00000226515 773 ntBASIC19.06■□□□□ 0.64
Cux2P70298 AC137842.2-201ENSMUST00000227734 797 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Gm7589-201ENSMUST00000085631 534 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC19.06■□□□□ 0.64
Cux2P70298 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC19.06■□□□□ 0.64
Cux2P70298 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC19.06■□□□□ 0.64
Cux2P70298 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cux2P70298 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux2P70298 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cux2P70298 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC19.05■□□□□ 0.64
Cux2P70298 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cux2P70298 Gm16209-201ENSMUST00000118457 627 ntBASIC19.05■□□□□ 0.64
Cux2P70298 Gm13281-201ENSMUST00000120871 567 ntBASIC19.05■□□□□ 0.64
Cux2P70298 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Gm10171-201ENSMUST00000126220 628 ntBASIC19.05■□□□□ 0.64
Cux2P70298 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC19.05■□□□□ 0.64
Cux2P70298 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 AC158986.2-201ENSMUST00000227487 618 ntBASIC19.05■□□□□ 0.64
Cux2P70298 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Gm10233-201ENSMUST00000089275 628 ntBASIC19.05■□□□□ 0.64
Cux2P70298 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cux2P70298 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Gm37437-201ENSMUST00000194451 1937 ntBASIC19.05■□□□□ 0.64
Cux2P70298 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux2P70298 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC19.05■□□□□ 0.64
Cux2P70298 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Cux2P70298 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gm22495-201ENSMUST00000104492 126 ntBASIC19.04■□□□□ 0.64
Cux2P70298 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC19.04■□□□□ 0.64
Cux2P70298 Gm14006-201ENSMUST00000122132 981 ntBASIC19.04■□□□□ 0.64
Cux2P70298 Gm4943-201ENSMUST00000132879 424 ntBASIC19.04■□□□□ 0.64
Cux2P70298 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cux2P70298 Gm26119-201ENSMUST00000175601 104 ntBASIC19.04■□□□□ 0.64
Cux2P70298 Gm20694-201ENSMUST00000176943 404 ntBASIC19.04■□□□□ 0.64
Cux2P70298 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cux2P70298 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cux2P70298 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cux2P70298 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cux2P70298 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gm19918-201ENSMUST00000194858 400 ntBASIC19.04■□□□□ 0.64
Cux2P70298 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC19.04■□□□□ 0.64
Cux2P70298 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC19.04■□□□□ 0.64
Cux2P70298 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Cux2P70298 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux2P70298 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms