Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Six5P70178 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Six5P70178 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.11□□□□□ -0.63
Six5P70178 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.11□□□□□ -0.63
Six5P70178 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.11□□□□□ -0.63
Six5P70178 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Mir7677-201ENSMUST00000184226 67 ntBASIC11.11□□□□□ -0.63
Six5P70178 Gm4857-201ENSMUST00000192718 785 ntBASIC11.11□□□□□ -0.63
Six5P70178 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Gm9257-201ENSMUST00000221254 232 ntBASIC11.11□□□□□ -0.63
Six5P70178 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Six5P70178 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.11□□□□□ -0.63
Six5P70178 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Six5P70178 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.11□□□□□ -0.63
Six5P70178 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Six5P70178 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Six5P70178 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Six5P70178 Gm28071-201ENSMUST00000190355 478 ntBASIC11.1□□□□□ -0.63
Six5P70178 Gm44262-201ENSMUST00000204969 372 ntBASIC11.1□□□□□ -0.63
Six5P70178 Gm18212-201ENSMUST00000211678 889 ntBASIC11.1□□□□□ -0.63
Six5P70178 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.1□□□□□ -0.63
Six5P70178 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.1□□□□□ -0.63
Six5P70178 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Six5P70178 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Six5P70178 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.09□□□□□ -0.63
Six5P70178 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.09□□□□□ -0.63
Six5P70178 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Six5P70178 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Six5P70178 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Six5P70178 Gm14017-201ENSMUST00000121934 386 ntBASIC11.09□□□□□ -0.63
Six5P70178 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.09□□□□□ -0.63
Six5P70178 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Six5P70178 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 Gm24749-201ENSMUST00000157838 343 ntBASIC11.09□□□□□ -0.63
Six5P70178 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Six5P70178 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms