Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Gm28693-202ENSMUST00000190758 331 ntBASIC11.75□□□□□ -0.53
Crnkl1P63154 AY702102-202ENSMUST00000194651 1173 ntBASIC11.75□□□□□ -0.53
Crnkl1P63154 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.75□□□□□ -0.53
Crnkl1P63154 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.75□□□□□ -0.53
Crnkl1P63154 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Crnkl1P63154 Gm10268-201ENSMUST00000085340 555 ntBASIC11.75□□□□□ -0.53
Crnkl1P63154 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Crnkl1P63154 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Crnkl1P63154 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Crnkl1P63154 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Crnkl1P63154 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Crnkl1P63154 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Crnkl1P63154 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm12742-201ENSMUST00000117326 410 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Snora78-201ENSMUST00000158630 128 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.74□□□□□ -0.53
Crnkl1P63154 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.74□□□□□ -0.53
Crnkl1P63154 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Crnkl1P63154 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm11637-201ENSMUST00000120601 592 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Mir7085-201ENSMUST00000184353 66 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms