Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl39P62892 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Rpl39P62892 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Rpl39P62892 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Rpl39P62892 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Rpl39P62892 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.42□□□□□ -1.06
Rpl39P62892 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.42□□□□□ -1.06
Rpl39P62892 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rpl39P62892 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Rpl39P62892 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Rpl39P62892 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Rpl39P62892 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Btrc-209ENSMUST00000224478 2194 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 AC167022.1-201ENSMUST00000218647 1458 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rpl39P62892 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm24934-201ENSMUST00000103764 111 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm13736-201ENSMUST00000119272 253 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Gm13342-201ENSMUST00000121055 207 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.41□□□□□ -1.06
Rpl39P62892 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC8.41□□□□□ -1.06
Rpl39P62892 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC8.41□□□□□ -1.06
Rpl39P62892 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm6244-201ENSMUST00000178732 841 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rpl39P62892 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm42693-201ENSMUST00000196779 631 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Gm42937-201ENSMUST00000197360 752 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC8.41□□□□□ -1.06
Rpl39P62892 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rpl39P62892 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm5356-201ENSMUST00000093326 615 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rpl39P62892 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Rpl39P62892 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rpl39P62892 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.41□□□□□ -1.06
Rpl39P62892 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Rpl39P62892 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rpl39P62892 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms