Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Rprl1-201ENSMUST00000158050 327 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm37424-201ENSMUST00000191727 561 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm35638-201ENSMUST00000220724 652 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Lect2-202ENSMUST00000225183 823 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b6P59708 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.54□□□□□ -0.72
Sf3b6P59708 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b6P59708 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b6P59708 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.53□□□□□ -0.72
Sf3b6P59708 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sf3b6P59708 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm16379-201ENSMUST00000161469 348 ntBASIC10.53□□□□□ -0.72
Sf3b6P59708 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm8762-201ENSMUST00000193486 339 ntBASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms