Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm28686-201ENSMUST00000187404 609 ntBASIC11.21□□□□□ -0.61
Nup43P59235 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.21□□□□□ -0.61
Nup43P59235 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 Gm5363-201ENSMUST00000211927 938 ntBASIC11.21□□□□□ -0.61
Nup43P59235 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.21□□□□□ -0.61
Nup43P59235 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.21□□□□□ -0.61
Nup43P59235 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup43P59235 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Nup43P59235 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.21□□□□□ -0.62
Nup43P59235 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Nup43P59235 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup43P59235 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Nup43P59235 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Nup43P59235 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Gm12266-201ENSMUST00000120311 962 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.2□□□□□ -0.62
Nup43P59235 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm17040-202ENSMUST00000170597 889 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Gm3332-201ENSMUST00000189337 928 ntBASIC11.2□□□□□ -0.62
Nup43P59235 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Nup43P59235 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.2□□□□□ -0.62
Nup43P59235 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.2□□□□□ -0.62
Nup43P59235 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Nup43P59235 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Nup43P59235 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup43P59235 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup43P59235 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup43P59235 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup43P59235 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms