Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Tpm1P58771 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tpm1P58771 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tpm1P58771 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.21□□□□□ -0.29
Tpm1P58771 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.21□□□□□ -0.29
Tpm1P58771 Gm39404-201ENSMUST00000216350 313 ntBASIC13.21□□□□□ -0.29
Tpm1P58771 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.21□□□□□ -0.29
Tpm1P58771 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.21□□□□□ -0.29
Tpm1P58771 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tpm1P58771 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Tpm1P58771 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Tpm1P58771 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tpm1P58771 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tpm1P58771 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.2□□□□□ -0.3
Tpm1P58771 Gm1335-201ENSMUST00000121653 386 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.2□□□□□ -0.3
Tpm1P58771 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.2□□□□□ -0.3
Tpm1P58771 Auts2-212ENSMUST00000178555 309 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.2□□□□□ -0.3
Tpm1P58771 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tpm1P58771 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Tpm1P58771 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.2□□□□□ -0.3
Tpm1P58771 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.2□□□□□ -0.3
Tpm1P58771 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tpm1P58771 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tpm1P58771 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Tpm1P58771 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms