Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm15595-201ENSMUST00000120840 961 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.82□□□□□ -0.52
Atxn1P54254 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm43752-201ENSMUST00000198475 697 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.82□□□□□ -0.52
Atxn1P54254 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atxn1P54254 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm15352-201ENSMUST00000118696 270 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.81□□□□□ -0.52
Atxn1P54254 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm28686-201ENSMUST00000187404 609 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Atxn1P54254 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm3619-201ENSMUST00000219947 775 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.81□□□□□ -0.52
Atxn1P54254 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Atxn1P54254 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.81□□□□□ -0.52
Atxn1P54254 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.81□□□□□ -0.52
Atxn1P54254 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atxn1P54254 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Atxn1P54254 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atxn1P54254 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Atxn1P54254 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Atxn1P54254 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm25063-201ENSMUST00000104666 94 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm13916-201ENSMUST00000117368 628 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Gm12943-201ENSMUST00000119616 210 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms