Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.44□□□□□ -0.58
Tnfsf4P43488 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfsf4P43488 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm11700-201ENSMUST00000119409 403 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm11793-201ENSMUST00000120433 981 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm13786-201ENSMUST00000122371 333 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm6114-201ENSMUST00000182472 968 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm6013-201ENSMUST00000212264 699 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gm8420-201ENSMUST00000097103 598 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.43□□□□□ -0.58
Tnfsf4P43488 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf4P43488 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.42□□□□□ -0.58
Tnfsf4P43488 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Gm37489-201ENSMUST00000191883 159 ntBASIC11.42□□□□□ -0.58
Tnfsf4P43488 Gm43002-201ENSMUST00000200310 155 ntBASIC11.42□□□□□ -0.58
Tnfsf4P43488 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Gm45880-201ENSMUST00000213041 853 ntBASIC11.42□□□□□ -0.58
Tnfsf4P43488 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf4P43488 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.42□□□□□ -0.58
Tnfsf4P43488 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms