Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fen1P39749 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fen1P39749 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm12314-201ENSMUST00000118104 538 ntBASIC11.94□□□□□ -0.5
Fen1P39749 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.94□□□□□ -0.5
Fen1P39749 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.94□□□□□ -0.5
Fen1P39749 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.94□□□□□ -0.5
Fen1P39749 Gm43818-201ENSMUST00000200605 466 ntBASIC11.94□□□□□ -0.5
Fen1P39749 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.94□□□□□ -0.5
Fen1P39749 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.94□□□□□ -0.5
Fen1P39749 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fen1P39749 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Fen1P39749 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Fen1P39749 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Fen1P39749 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Fen1P39749 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Fen1P39749 Gm13392-201ENSMUST00000117708 150 ntBASIC11.93□□□□□ -0.5
Fen1P39749 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Fen1P39749 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gm8738-201ENSMUST00000172606 329 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.93□□□□□ -0.5
Fen1P39749 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gm37424-201ENSMUST00000191727 561 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Gm42693-201ENSMUST00000196779 631 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.93□□□□□ -0.5
Fen1P39749 Gm39404-201ENSMUST00000216350 313 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Gm5781-201ENSMUST00000219792 443 ntBASIC11.93□□□□□ -0.5
Fen1P39749 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fen1P39749 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.92□□□□□ -0.5
Fen1P39749 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.92□□□□□ -0.5
Fen1P39749 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Fen1P39749 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Fen1P39749 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fen1P39749 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms